Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs13108780 chr4:6294630 A/G 1.43E-6 118 25.83 38.58 50.1 KM Plot
THYM rs13114527 chr4:6294655 T/G 1.43E-6 118 25.83 38.58 50.1 KM Plot
THYM rs13116796 chr4:78152466 G/C 9.73E-6 117 39.75 45.87 31.72 KM Plot
THYM rs13123057 chr4:70061403 G/T 5.73E-13 118 39.75 49.6 6 KM Plot
THYM rs13128287 chr4:187166978 G/T 1.5E-8 118 12.63 45.58 40.67 KM Plot
THYM rs13128674 chr4:6294517 C/T 1.43E-6 118 25.83 38.58 50.1 KM Plot
THYM rs13130398 chr4:78159988 C/T 7.44E-6 119 38.83 46.23 31.72 KM Plot
THYM rs13130845 chr4:6297646 A/C 1.23E-6 114 25.83 38.83 50.1 KM Plot
THYM rs13133791 chr4:126080345 A/T 4.34E-5 119 48 31.35 38.13 KM Plot
THYM rs13147655 chr4:6293474 A/G 1.25E-6 119 25.83 38.58 50.13 KM Plot
THYM rs13178488 chr5:72695639 G/A 0.000128 116 46.27 35 22.4 KM Plot
THYM rs13191362 chr6:163033350 A/G 0.000256 119 46.23 27.33 25.8 KM Plot
THYM rs13191389 chr6:3268779 C/G 0 118 4.13 44.3 38.33 KM Plot
THYM rs13191400 chr6:3268796 C/T 0 118 4.13 44.3 38.33 KM Plot
THYM rs13192894 chr6:163052444 T/A 0.000281 118 46.23 27.33 25.4 KM Plot